PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00017.1.g00840.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family HB-other
Protein Properties Length: 60aa    MW: 6597.7 Da    PI: 8.2421
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00017.1.g00840.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox19.41.8e-0612392350
                                    SS--HHHHHHHHHHCTS-HHHHHHHHHH CS
                        Homeobox 23 rypsaeereeLAkklgLterqVkvWFqN 50
                                     y+++ +r+eL+  lgLt+rq   WF+ 
  Zjn_sc00017.1.g00840.1.sm.mkhc 12 LYLNEGKRTELSVLLGLTDRQLPAWFCH 39
                                    599***********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.54E-51147IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.9E-51138IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 60 aa     Download sequence    Send to blast
MDPTAAMATK DLYLNEGKRT ELSVLLGLTD RQLPAWFCHI QMGHGRCLTT TVRSMAGMAS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2816233