PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00017.1.g03630.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 383aa    MW: 40562.6 Da    PI: 5.1566
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00017.1.g03630.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.2e-10106153253
                                   HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                           HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                                   r++  + Er RR+ +++ f+eLr llP      skK +  +++e++++YI  
  Zjn_sc00017.1.g03630.1.am.mk 106 RTSTFMLERARRKLMKENFAELRALLPGV----SKKTNRETTVEETIRYIGV 153
                                   89999***********************8....7****************65 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.34E-13102170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.45E-9103159No hitNo description
PROSITE profilePS5088812.481104154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-12106172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-8106154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-8110160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550215.73E-6244303No hitNo description
PROSITE profilePS5167110.103249333IPR002912ACT domain
Gene3DG3DSA:3.30.70.2605.7E-4249304No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MAQDGHHAGH LQGADGNGTP PPAITREPGL GESSNQASTW TPVPAVAAEV DGSNGKGDDV  60
VPSVHGADLA AGNVDAGADV MVAEEDVSTK SKGKAPASDG AGKKARTSTF MLERARRKLM  120
KENFAELRAL LPGVSKKTNR ETTVEETIRY IGVLEDTVKT LQQRKQELTV ERERRQAAAQ  180
PDLGAGPSSA APPDAGQVPI LSPVLPQGWC WLPKQQPAAP GAVAEPPRVG FRTWTDSNVV  240
MNVCGDTAFI TVCAAPRPGV LVLLLSVLAK HHIDVLTLEI SSDANRSLFH MCTRVNLEEI  300
KQLDPEAPAS DDIFQLALSE IIRTRIGSRS VGASLGLFVD PREDALHDPA LRHTPVLPNG  360
DNDEARASGL ESVQHAEANV SEC
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2480335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.18e-17bHLH family protein