PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00018.1.g07000.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 289aa    MW: 32714.8 Da    PI: 5.1294
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00018.1.g07000.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.31.1e-1713115191
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pk......kvkaeekewyfFskrdkkyatgkrk 74 
                                   lppGfrF+ tdeel+ +yL++k+++  +    +++evd+yk+ePwdL p+         +e++  yfF+ r+ k ++g r+
  Zjn_sc00018.1.g07000.1.sm.mk  13 LPPGFRFRRTDEELLAHYLARKAADAGFYS-AAVREVDLYKAEPWDLlPAagggggDDGSEDSCRYFFCARRVKFPSGLRS 92 
                                   79*************************888.78**************544455543222244455*********9977765 PP

                           NAM  75 nra......tksgyWkatgkdke 91 
                                   + +      +++  W+ +g   +
  Zjn_sc00018.1.g07000.1.sm.mk  93 EDQqgdarrVQEVHWEGQGVAAT 115
                                   54323333367888998887655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-19993IPR003441NAC domain
PROSITE profilePS5100518.64213174IPR003441NAC domain
PfamPF023652.6E-914111IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MGNDNCDRPC TGLPPGFRFR RTDEELLAHY LARKAADAGF YSAAVREVDL YKAEPWDLLP  60
AAGGGGGDDG SEDSCRYFFC ARRVKFPSGL RSEDQQGDAR RVQEVHWEGQ GVAATARLRR  120
RRWRQPSWGE EDARAALLEE RRPVGSCTST GLYMDTTLLL KLQQEEQLRM FMKKPPGEET  180
TPYQEKILRP LVDDHHMQIM PTGGKTPAAA TVAAGSEHVS CFYDDAEAKT PDDHEKFQSL  240
PQLNPEELLL NWPEQDDLPS SMYRVYLYVL QKCIIQYTVP LARLENSLT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-121211214101Stress-induced transcription factor NAC1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116123RLRRRRWR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4393333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.24e-20NAC domain containing protein 80