PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00018.1.g07270.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 394aa    MW: 42202.3 Da    PI: 8.8175
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00018.1.g07270.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY60.92.3e-192432921159
                                   EEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY  11 GqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   G+K+ +++++pr+Y+rC++a +Cp++kkv+r+aed++++e +Yeg+Hnh 
  Zjn_sc00018.1.g07270.1.am.mk 243 GRKMTRDNPYPRAYFRCAYApSCPARKKVQRCAEDKSMLEAHYEGQHNHV 292
                                   99*****************99****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.857241291IPR003657WRKY domain
SMARTSM007741.2E-16243293IPR003657WRKY domain
SuperFamilySSF1182904.71E-15243291IPR003657WRKY domain
PfamPF031062.8E-15243291IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.7E-17243292IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009620Biological Processresponse to fungus
GO:0009751Biological Processresponse to salicylic acid
GO:0010200Biological Processresponse to chitin
GO:1900425Biological Processnegative regulation of defense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MTGLKEEVSA IPSPFDELSR TLVESACDHC RRLRRQETLF HAGDGDTTPQ HQDSGPSGSW  60
LVRESRRAAA SPSLSTTTIS VRLLVRFENE KNQILVTAAH GKTSDAGEAA SPGDGSMVTS  120
MRTEDRRSVA MDNGECSSPS GSGAGLLPLF APASPAESLE EKLRRMIEEN RRLAGALDAI  180
LAGRRHARAP SPSNAVVVAA AAGPEQCGGG GRRRRRDGGA VPEGQDAAGA RPAVGRRGQP  240
REGRKMTRDN PYPRAYFRCA YAPSCPARKK VQRCAEDKSM LEAHYEGQHN HVKCARSEFA  300
GDASTTSQQG TSGSRPCSIS INSLGRTITL GLTNQGSGSK EELSVVGQMV APEFLKVLVK  360
ELANFLMNDS QFMESLTSAV TARMMEKTSD ARIF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956832.15e-89WRKY transcription factor WRKY62
TrEMBLK3ZW131e-87K3ZW13_SETIT; Uncharacterized protein
STRINGSi030794m2e-88(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129212834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.12e-26WRKY DNA-binding protein 18