PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00019.1.g03870.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 301aa    MW: 33281.5 Da    PI: 9.889
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00019.1.g03870.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.73.5e-21207264258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSS.TTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaed.pkvveitYegeHnh 58 
                                   +Dgy+W+KYGqK +k+ +  rsY+rC ++ C +kkkve    d +  v ++Yeg H+h
  Zjn_sc00019.1.g03870.1.am.mk 207 EDGYEWKKYGQKFIKNIQKMRSYFRCRHKLCGAKKKVEWLPGDaGGDVRVVYEGAHQH 264
                                   7**************************************998834679*********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.66201267IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.9E-22202267IPR003657WRKY domain
SuperFamilySSF1182906.8E-20203267IPR003657WRKY domain
SMARTSM007742.7E-23206266IPR003657WRKY domain
PfamPF031061.0E-19207264IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MNKRRRLLLV FAGTKRDCCR GSGSSCSSDA EYTTTRFRSG FSIRKKQGIG RARSRATTAT  60
DRVLDSYESG PGENLRNSRS LSWATILLLV YRCIYPAKAY GDWVSVYFYY LESADTCEPA  120
DFHIHVATKH GRLSELHGCS QNRWPPTLPT PDWWGPRKLR APLSATTGKP KIRALLLLLE  180
STGEAGEERN EGAAAETGIG NQLEMPEDGY EWKKYGQKFI KNIQKMRSYF RCRHKLCGAK  240
KKVEWLPGDA GGDVRVVYEG AHQHGSPTSA HGSGQGGSSG GGGAANQYEL RAQYFGGSRS  300
L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
126KRRRL
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9706331e-63EU970633.1 Zea mays clone 348246 hypothetical protein mRNA, complete cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP101583444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.14e-13WRKY family protein