PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00020.1.g00370.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family EIL
Protein Properties Length: 416aa    MW: 46405.3 Da    PI: 4.7243
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00020.1.g00370.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3343.54.6e-105393292297
                                   XXXXXXXXXXXXXXXXXXXXXX..XXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                          EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa......tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgi 76 
                                   +lk rmw dqmll++l++r       + ++          +++ +  ++rrk+m raQDg+L++Mlk+me+cna+GfvYg 
  Zjn_sc00020.1.g00370.1.sm.mk  39 DLKWRMWTDQMLLNKLEGRAGAFRSVAFPSrplpppPADGQEEPPDVRSRRKAMLRAQDGVLRHMLKMMEACNARGFVYGV 119
                                   89******************998766666688898844445689999********************************** PP

                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS CS
                          EIN3  77 ipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdp 157
                                   i+e g+p++g+sdsLr+WWk++v+fdr gp+ ++   a      ges +   +ss  h+l+++qD+tlgS+Lsal+qhc+p
  Zjn_sc00020.1.g00370.1.sm.mk 120 IDEAGEPMSGSSDSLRGWWKDNVNFDRSGPMGLTGPGA------GESPRGL-ASSCLHRLQDIQDSTLGSVLSALIQHCEP 193
                                   **********************************9953......4444434.8999************************* PP

                                   -TTS--TTT--HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT CS
                          EIN3 158 pqrrfplekgvepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdk 237
                                   pqr+fple+g++pPWWPtG+e wwg++g ++++qg ppy+kphdlkkawk+s+L+avikhmsp+++++r+l++qsk+lq++
  Zjn_sc00020.1.g00370.1.sm.mk 194 PQRSFPLEQGLAPPWWPTGQEVWWGSQGeVQAHQGVPPYRKPHDLKKAWKISLLSAVIKHMSPRFDQMRKLVWQSKRLQQR 274
                                   ********************************************************************************* PP

                                   --SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX CS
                          EIN3 238 msakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqa 297
                                   m+ake+ +++++l qee +  +++++      q + + ++++++e+++g ++      q 
  Zjn_sc00020.1.g00370.1.sm.mk 275 MRAKETETWSKILLQEEVLSCRLKTSL-----QIKPLDVDDDDEEQQDGLEDVVACRTQD 329
                                   *****************9877777665.....6777888887666666433333222333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.0E-10939291No hitNo description
Gene3DG3DSA:1.10.3180.103.7E-62166299IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167684.84E-55169293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MEHDVASDLE VAALEPAEQQ EEEEVSNSES GSESIEISDL KWRMWTDQML LNKLEGRAGA  60
FRSVAFPSRP LPPPPADGQE EPPDVRSRRK AMLRAQDGVL RHMLKMMEAC NARGFVYGVI  120
DEAGEPMSGS SDSLRGWWKD NVNFDRSGPM GLTGPGAGES PRGLASSCLH RLQDIQDSTL  180
GSVLSALIQH CEPPQRSFPL EQGLAPPWWP TGQEVWWGSQ GEVQAHQGVP PYRKPHDLKK  240
AWKISLLSAV IKHMSPRFDQ MRKLVWQSKR LQQRMRAKET ETWSKILLQE EVLSCRLKTS  300
LQIKPLDVDD DDEEQQDGLE DVVACRTQDK RKRELISSSP SRDSGAKELA VVLPPELAGL  360
AADESGIPVD DLVKLYYSCV PEHAGVHPGY DSPDVLFDLI GNCSGVDDVL RRMQEE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A6e-471672971130Protein ETHYLENE INSENSITIVE 3
4zds_B6e-471672971130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004955019.10.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9LX169e-92EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A3L6RQ530.0A0A3L6RQ53_PANMI; ETHYLENE INSENSITIVE 3-like 5 protein
STRINGPavir.Ab01993.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.19e-89EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]