PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00023.1.g04830.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WOX
Protein Properties Length: 1108aa    MW: 120643 Da    PI: 10.1707
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00023.1.g04830.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.15.6e-179601019357
                                    --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                      Homeobox    3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57  
                                    +R+++ +eq+++Le l++   r+p+  ++e ++++l    +++ ++V++WFqN++a+e++
  Zjn_sc00023.1.g04830.1.am.mk  960 TRWNPCPEQIKVLEMLYRGgMRTPNSFQIECITEELgkygRIQGKNVFYWFQNHKARERQ 1019
                                    8*****************99**************************************97 PP
2Wus_type_Homeobox108.44.3e-359591021365
             Wus_type_Homeobox    3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65  
                                    +tRW+P peQik+Le+ly+ G+rtPn+ +i+ it+eL +yG+i++kNVfyWFQN+kaRerqkq
  Zjn_sc00023.1.g04830.1.am.mk  959 TTRWNPCPEQIKVLEMLYRGGMRTPNSFQIECITEELGKYGRIQGKNVFYWFQNHKARERQKQ 1021
                                    79***********************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF520581.36E-27134304IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.101.1E-33134283IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.30.200.208.4E-14466542No hitNo description
PfamPF000691.2E-7466552IPR000719Protein kinase domain
SuperFamilySSF561124.32E-22467631IPR011009Protein kinase-like domain
Gene3DG3DSA:1.10.510.103.4E-10546628No hitNo description
SMARTSM003897.8E-49571024IPR001356Homeobox domain
PfamPF000461.2E-149601019IPR001356Homeobox domain
CDDcd000860.006489601021No hitNo description
SuperFamilySSF466894.34E-109601025IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.6E-59611019IPR009057Homeodomain-like
PROSITE profilePS500718.9739671020IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 1108 aa     Download sequence    Send to blast
MFGSISDAKL HVPPHVLPRP PADPSLRSRA NGHQRSSKPR QLPLQGTATT AKHTHSAPLK  60
STTTSQPRRN AAPPPPPRLP PPAATPPHRR LGCRRGPSRR RIAPAAHAAD TRPVPSFLAK  120
ADPSSHLRVP PAASLCSQPG ISCSAAGQVT RLVLESAGLN GTFAPATLSR LAELRVLSLK  180
SNALHGPVPD LSDLVNLKAI YLAGNRFSGP FPVSLASLGR LRSIDLSGNR LSGALPVGIE  240
AVFPHLTFLR LDANHFNGSL PPWNQSELKV LNVSYNDFSG PVPVTPVMTQ MGAAAFAGNP  300
KLCGEVVRRE CHLPFFHGDG STSSAAPPVQ SAAASDGGPQ REGLSTPDSS APRSKRAKRR  360
TTVAIAVSVG GVLALLLCAM IAMKRSNKRR RPRSVAYPSP KKSAAASDVS RDNADIGYVE  420
CVRDEETAAI MVPEEKARRL ERSGCLTFCA GEAASYSLEQ LMRASAEVLG RGSVGTTYKA  480
VLDGRLVVIV KRLDAAKIGP AALEAETFEQ NMDSVGRLRH PNLVPLRAFF QAKEERLLVY  540
DYQPNGSLYS LVHDIYAFGV LLIELLSGKP PLQHSVLVAT NLPTYVQSAR EDEGVDRDRI  600
SMIVDIAATC IRSSPESRPT AWQVLKMIQE VKEADTTGDI GDNDTETQDE PCHAYALHWR  660
PRPSDQQVTL RTATIFPARR GTSLQSWYRR CSVLRFRSMQ RKYAAFRLPD ALLLLLLRRG  720
VFPTRPPAVQ HGACTPSRSS ARRAGRPGAS ALALAIAFHF SELLASQFTA LYRDWHGLSF  780
ANPTTQTHAL IPVSGLISPG KDQLLAHAWE HGQPQQHIPS FWFVLSLHIP SRPVDRSPPT  840
KACSTPFDCY LDLSHATLRP SISGLYRSII SGRCLPIYKH ARTLDKAASS SSPPSLITSS  900
SSAIPALSLH QCLRPLAPKI SFPESRKKMV VLPEFTRVRN SARLLNCTEL QVQVPMAGTT  960
RWNPCPEQIK VLEMLYRGGM RTPNSFQIEC ITEELGKYGR IQGKNVFYWF QNHKARERQK  1020
QKRAALLTLS TTSSSLPAET KQDGEEKKEV SEEDAASVSC KRRCKSWGDV HGVGDAATAE  1080
VADDHCTNDD VTLELFPLRP QGKASYSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wls_A2e-1914031134207Pollen receptor-like kinase 3
5wls_B2e-1914031134207Pollen receptor-like kinase 3
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP538434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46480.13e-34WUSCHEL related homeobox 4