PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00024.1.g01730.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Nin-like
Protein Properties Length: 192aa    MW: 19713.3 Da    PI: 10.703
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00024.1.g01730.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK24.93.9e-082331042
                        RWP-RK 10 lskyFslpikdAAkeLgvclTvLKriCRqyGIk 42
                                  +s +F++pik+ +++  v+lTvLK+ CR+++I+
  Zjn_sc00024.1.g01730.1.sm.mk  2 VSLHFNMPIKQPSRS-AVGLTVLKKLCRKLNIP 33
                                  6789**********9.7*************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MVSLHFNMPI KQPSRSAVGL TVLKKLCRKL NIPPCCMESP VPVRVAAAHQ LGRPAACPSV  60
RRHRLAGRWG SAPRGTRKGS SGSKAWATTA ASWGEPAGRR GGEPVGRTAN HGGGTAATAK  120
DTLGYLRPST GSCPSTAACT SFEERDARAA QAPAEAAEAA TGVGSGPATQ EVADQGGVCA  180
GETLWGKGWK GW