PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00027.1.g06760.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 483aa MW: 52976 Da PI: 11.1424

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00027.1.g06760.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	58.4	1.4e-18	348	408	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS.STTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae.dpkvveitYegeHnh 58 +D ++WrKYG K++ +sefpr YY+C+++ +Cp+kk v+++++ dp + +t +H++ Zjn_sc00027.1.g06760.1.am.mk 348 NDRFHWRKYGEKKILDSEFPRLYYKCSYSddhKCPAKKYVQQQNNgDPPQFLVTLVYKHTC 408 7*************************99999*****987643888888888888887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	3.2E-19	343	409	IPR003657	WRKY domain
SuperFamily	SSF118290	8.76E-19	344	409	IPR003657	WRKY domain
SMART	SM00774	4.7E-27	347	410	IPR003657	WRKY domain
Pfam	PF03106	1.1E-19	348	408	IPR003657	WRKY domain
PROSITE profile	PS50811	14.573	348	406	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence Send to blast
MHFHPTPLLD AAATGSSVPP RRAPHRGSFA VGGHPPIRSC RRSSKLAGWG AVLSRLGSSD 60 GGGAARKLGW RWRRLGARTG GGAALEPWWG RRSTRADLGL RSLGARPWSP ARASTARPLG 120 RASKRRSPTQ HPWPVASRGR AGEERGEGTT GWRWVGRGVK TALHPLKSST PRSMSTRPKS 180 ARVSPQPPSP PAPSNQRDAA IQELRRGSQL AAMLRQQLEL IPEVDRREAA AASVSEIAEA 240 MDSSLFILQS ESEHSSSQAG AMAMPSPADL SSDVSTGTRR AAVPRARKVR HRRGRLGELP 300 VRLCVGLGDC AWRPGCEMAR RQRCRVWPGG ARLQCAVPKE ILTDGPQNDR FHWRKYGEKK 360 ILDSEFPRLY YKCSYSDDHK CPAKKYVQQQ NNGDPPQFLV TLVYKHTCGT LFRDEASSSS 420 GSLQVLDFRN ASVGPPLATA TLGLKKEEDT DISMYMQSYE YELSQMMPPN GDQANFSPGP 480 RWS

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence Send to blast

MHFHPTPLLD AAATGSSVPP RRAPHRGSFA VGGHPPIRSC RRSSKLAGWG AVLSRLGSSD  60
GGGAARKLGW RWRRLGARTG GGAALEPWWG RRSTRADLGL RSLGARPWSP ARASTARPLG  120
RASKRRSPTQ HPWPVASRGR AGEERGEGTT GWRWVGRGVK TALHPLKSST PRSMSTRPKS  180
ARVSPQPPSP PAPSNQRDAA IQELRRGSQL AAMLRQQLEL IPEVDRREAA AASVSEIAEA  240
MDSSLFILQS ESEHSSSQAG AMAMPSPADL SSDVSTGTRR AAVPRARKVR HRRGRLGELP  300
VRLCVGLGDC AWRPGCEMAR RQRCRVWPGG ARLQCAVPKE ILTDGPQNDR FHWRKYGEKK  360
ILDSEFPRLY YKCSYSDDHK CPAKKYVQQQ NNGDPPQFLV TLVYKHTCGT LFRDEASSSS  420
GSLQVLDFRN ASVGPPLATA TLGLKKEEDT DISMYMQSYE YELSQMMPPN GDQANFSPGP  480
RWS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022681297.1	4e-84	probable WRKY transcription factor 63
TrEMBL	K3Z8R3	9e-83	K3Z8R3_SETIT; Uncharacterized protein
STRING	Si022933m	1e-83	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9993	29	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	7e-16	WRKY DNA-binding protein 55