PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00028.1.g02980.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 368aa MW: 39741.4 Da PI: 8.0986

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00028.1.g02980.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.2	1.1e-10	177	224	4	50
XCHHHCHHH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqk.NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +k+ r+k+k NReA r++Rq++ka +e+Lee+vk+L a N+++ k+l+ Zjn_sc00028.1.g02980.1.am.mk 177 DKAKRKKAKgNREAVRKYRQKRKAHTERLEEEVKQLRAANQQMVKRLQ 224 7888888888*********************************99987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.2E-8	169	242	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	3.0E-11	176	232	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.14	177	224	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.4E-13	177	243	No hit	No description
CDD	cd14686	6.55E-11	179	233	No hit	No description
SuperFamily	SSF57959	2.5E-6	180	225	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence Send to blast
MRTSNKRKEP GDGARERDGY VVTAQDLPVP DELLRSFPPH LPGTGSPTAL GRGSWLGLSA 60 TEAAAEEGAE WRRSEAWGLG LPRVGRDGTR EPSEAVRAAL RLGLSSVLSF LTGSAVPLER 120 GDTSSTLDDF LKTITTTCTH THTCNPPGPS EPAHTHTCHH THTRVFSTDD DDGCGSDKAK 180 RKKAKGNREA VRKYRQKRKA HTERLEEEVK QLRAANQQMV KRLQGQAALE AEVVRLRSLL 240 VDVRAKIDGA LGSYPFRAEQ CGGGSGLSCD EFIEFSLSQL SLPNKCHDGE RGGSYSEEVT 300 RAVGWAGPRR AVAAAAVLGG RGPETGGDAS DEQQESRHQL GGTRVAIHLA LLRRSGWLET 360 FDLLGLAL

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence Send to blast

MRTSNKRKEP GDGARERDGY VVTAQDLPVP DELLRSFPPH LPGTGSPTAL GRGSWLGLSA  60
TEAAAEEGAE WRRSEAWGLG LPRVGRDGTR EPSEAVRAAL RLGLSSVLSF LTGSAVPLER  120
GDTSSTLDDF LKTITTTCTH THTCNPPGPS EPAHTHTCHH THTRVFSTDD DDGCGSDKAK  180
RKKAKGNREA VRKYRQKRKA HTERLEEEVK QLRAANQQMV KRLQGQAALE AEVVRLRSLL  240
VDVRAKIDGA LGSYPFRAEQ CGGGSGLSCD EFIEFSLSQL SLPNKCHDGE RGGSYSEEVT  300
RAVGWAGPRR AVAAAAVLGG RGPETGGDAS DEQQESRHQL GGTRVAIHLA LLRRSGWLET  360
FDLLGLAL

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP44522	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16770.1	3e-21	bZIP family protein