PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00029.1.g01940.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 453aa MW: 49620.7 Da PI: 9.828

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00029.1.g01940.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	70.7	3.7e-22	139	270	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr..at 78 f+ +P+d el+ yL++ ve+ +i+++d+y eP +L + + + +e+ wyf ++ ++k++ gkrk+r at Zjn_sc00029.1.g01940.1.am.mk 139 FHTQPSDLELLRSYLRPWVESGLKAG-AFIHDADVYADEPARLTEtfapaASQDGERAWYFLTPLHRKSEGGKRKSRtvAT 218 5668*************9988555.78**********74467755566888****************7668 PP NAM 79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g W++ k+k+v++ ++++vg ++++ f k++ + +t W+m e rl Zjn_sc00029.1.g01940.1.am.mk 219 GEGWWHNEAKSKPVVDGldGRRHVGYRQSFSFMKKEGSLRIRTGWLMLELRL 270 89*********98888899******9999999*****99887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	32.362	135	289	IPR003441	NAC domain
SuperFamily	SSF101941	3.66E-29	139	289	IPR003441	NAC domain
Pfam	PF02365	1.1E-12	139	270	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence Send to blast
MLRVRYGGCA DGEIERFICL KLPASTTVSP IHSPIGPGYT RTSAALPLDK RPAAFPQKPE 60 RKTNLARPLG ASPFNSNRPS PAAQESVARR NPTRFLRLFG YARPPPPLGR PLSVSVYMVR 120 SPTTPPPTPN GKPAPNAPFH TQPSDLELLR SYLRPWVESG LKAGAFIHDA DVYADEPARL 180 TETFAPAASQ DGERAWYFLT PLHRKSEGGK RKSRTVATGE GWWHNEAKSK PVVDGLDGRR 240 HVGYRQSFSF MKKEGSLRIR TGWLMLELRL GDAEDPREGG LVLCKVYRSP RHPGTITCPA 300 ARDQLPRPER KTNDDERSDA AAGRRKFDGE GSSAATPRIT YEAIPDTAAA AARGRKEKAA 360 DDNDDSDETW LNSPDSKRKA ANDETSVAAS AAEHAQSKRK TEGGLHYCPQ CGFHLDAVMA 420 AVNAKSSETK SEVGIVQVQG DSLVKDHSFH QFI

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence Send to blast

MLRVRYGGCA DGEIERFICL KLPASTTVSP IHSPIGPGYT RTSAALPLDK RPAAFPQKPE  60
RKTNLARPLG ASPFNSNRPS PAAQESVARR NPTRFLRLFG YARPPPPLGR PLSVSVYMVR  120
SPTTPPPTPN GKPAPNAPFH TQPSDLELLR SYLRPWVESG LKAGAFIHDA DVYADEPARL  180
TETFAPAASQ DGERAWYFLT PLHRKSEGGK RKSRTVATGE GWWHNEAKSK PVVDGLDGRR  240
HVGYRQSFSF MKKEGSLRIR TGWLMLELRL GDAEDPREGG LVLCKVYRSP RHPGTITCPA  300
ARDQLPRPER KTNDDERSDA AAGRRKFDGE GSSAATPRIT YEAIPDTAAA AARGRKEKAA  360
DDNDDSDETW LNSPDSKRKA ANDETSVAAS AAEHAQSKRK TEGGLHYCPQ CGFHLDAVMA  420
AVNAKSSETK SEVGIVQVQG DSLVKDHSFH QFI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004969524.2	8e-80	protein ATAF2
TrEMBL	A0A368R932	2e-78	A0A368R932_SETIT; Uncharacterized protein
TrEMBL	K3XIX7	1e-78	K3XIX7_SETIT; Uncharacterized protein
STRING	Si001850m	2e-79	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4011	29	72

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	3e-18	NAC domain containing protein 47