PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00031.1.g03740.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 460aa    MW: 51097.6 Da    PI: 6.3305
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00031.1.g03740.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY60.43.3e-19136190260
                                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                                     dDgy+Wr+YG  + k    + +YY+Ct++gCp kk v rs  d++++ei+Y+g+Hnh+k
  Zjn_sc00031.1.g03740.1.sm.mkhc 136 DDGYTWRRYGVQQGK---SSENYYKCTYRGCPEKK-VVRSLADGRITEIIYKGKHNHPK 190
                                     8*********66555...5567**********999.556666***************85 PP
2WRKY64.32.1e-20373417246
                                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTT CS
                            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpk 46 
                                     dDg++Wr YGqK+v g  +prsYY+C+  gCpv+k+++r +++ +
  Zjn_sc00031.1.g03740.1.sm.mkhc 373 DDGFRWRMYGQKQVMGDLYPRSYYKCARLGCPVRKHIQRPSDNWH 417
                                     8**************************************997765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182902.22E-15132191IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.4E-16132191IPR003657WRKY domain
SMARTSM007743.2E-14135190IPR003657WRKY domain
PfamPF031062.7E-14136189IPR003657WRKY domain
PROSITE profilePS5081115.571136191IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.2E-18363415IPR003657WRKY domain
PROSITE profilePS5081119.611367415IPR003657WRKY domain
SuperFamilySSF1182905.1E-18370418IPR003657WRKY domain
SMARTSM007741.7E-14372449IPR003657WRKY domain
PfamPF031061.2E-16373415IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MEAEAPMSSS RGAMGPLLRK LDLLLATEYP LRRSLKQAIE LLKEDLEEVG AALVQQSMVD  60
APSNKARYWM DEYFDLGNST EENVRSLAPG ADESDRRVAE IAVKDAIHKH PRFYDFLNIE  120
RGDWIEEDEI HVYKQDDGYT WRRYGVQQGK SSENYYKCTY RGCPEKKVVR SLADGRITEI  180
IYKGKHNHPK PLFAGNIVAQ DHHTVSTGVA GCGPKHSGAK PQTSCVTFSD GNADNSGLIF  240
VDDIAAQDHH TVFRAAAGCA LEHSGAKPET SCVTFDDNDA DHSSSYLSDD DEPDAKRRKE  300
DAYSEDSLAG VGAGGKTVRE PWLVAQTLSD GDEPGTKRWK NDAENEGSSA GTGGKTVREP  360
RKVVRTPGDV VFDDGFRWRM YGQKQVMGDL YPRSYYKCAR LGCPVRKHIQ RPSDNWHIAP  420
ELGTPRFARC HHHAGTNDAL LEDAHTESTN RVAVGGRQRT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-13364411856Probable WRKY transcription factor 4
2lex_A3e-13364411856Probable WRKY transcription factor 4
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-37WRKY DNA-binding protein 33