PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00033.1.g01760.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 252aa    MW: 28062.5 Da    PI: 5.2348
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00033.1.g01760.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.92.2e-071260255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                                  +y+GV++ + +g+W++ I        r    + +g fgtae Aa a++++ +++ g
  Zjn_sc00033.1.g01760.1.sm.mk 12 RYRGVTRLP-NGKWRSIIFN------RddYEYTIGDFGTAEAAALAHDRMILAILG 60
                                  69*******.8****88544......346999****************99888766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.57E-91270IPR016177DNA-binding domain
SMARTSM003801.1E-41277IPR001471AP2/ERF domain
CDDcd000188.10E-121273No hitNo description
PfamPF008471.2E-41258IPR001471AP2/ERF domain
PROSITE profilePS5103213.1821271IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-91271IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MATAVPTTEV LRYRGVTRLP NGKWRSIIFN RDDYEYTIGD FGTAEAAALA HDRMILAILG  60
PDASAEVLNF RAAFSDTELR FLRGRHSPAR CVAGVVAMLR KGEYDAEFAR FAEHAFDAYM  120
DPELAQDVAS FRFAHNDALL RRKEAAVVAA AGANVDPAAR AKAERDAERE VFLDAVKNKA  180
NDEAWVKSYH RRRRQFGPTV EDENRWPPVV PAADVDVDDW LPGEELIYLP HGSSYVDEMI  240
LGDGLAKKEH GA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5UKQ21e-105A0A1E5UKQ2_9POAL; Uncharacterized protein
STRINGSb01g022380.11e-105(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP150581718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.22e-08related to ABI3/VP1 2