PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00038.1.g03490.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 489aa MW: 52468.5 Da PI: 11.3022

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00038.1.g03490.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	32.1	2.6e-10	89	112	2	25
G2-like 2 prlrWtpeLHerFveaveqLGGse 25 pr+rWt+ LH++Fv+ave LGG+e Zjn_sc00038.1.g03490.1.am.mk 89 PRMRWTTALHAHFVQAVELLGGHE 112 9*********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	9.3E-8	86	113	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence Send to blast
MSSTTVTGAT PDLSLHISPP SPADGGGETP EPSSTLRLGL DTAAKTVVDA AQHGLLVQQR 60 LHQPSQTAHG FKKSSGAGAR GGKRCSRAPR MRWTTALHAH FVQAVELLGG HESQGQAREM 120 GFLMGRGDAP EMDGLFDGFN CNVVNTTAMF SSNSSTSRRS QSSTAEHHHS AAWIQALLVQ 180 HQESGNDDEE PMRHHLPASP ACRLQLPHHH RDRAPQPDRI LMTEQRRQMQ KGGAQDHHGD 240 GAVVHDLAEA AGPGPAVSQQ NRLPTPPPPP PPPLHHHERA EMVVVVSSNT SSGSDTASSS 300 DWLRQTRYGD ISWTVEAPPP PPSLEMSLGR QGWQMEPSPS SKEQTLLKCL RRPAGPTIFS 360 ALLTAKARAP DPGTGNQPRG TRQRSTTTIR APSSWELAVE AGPIRRRRLD EANPRAGPGR 420 VDPRARRRAH STLATGASRR TAAGPSVPLP AARTGNEARV DLAGRPAGGR ANWLLSWRRR 480 VGSSARSTV

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence Send to blast

MSSTTVTGAT PDLSLHISPP SPADGGGETP EPSSTLRLGL DTAAKTVVDA AQHGLLVQQR  60
LHQPSQTAHG FKKSSGAGAR GGKRCSRAPR MRWTTALHAH FVQAVELLGG HESQGQAREM  120
GFLMGRGDAP EMDGLFDGFN CNVVNTTAMF SSNSSTSRRS QSSTAEHHHS AAWIQALLVQ  180
HQESGNDDEE PMRHHLPASP ACRLQLPHHH RDRAPQPDRI LMTEQRRQMQ KGGAQDHHGD  240
GAVVHDLAEA AGPGPAVSQQ NRLPTPPPPP PPPLHHHERA EMVVVVSSNT SSGSDTASSS  300
DWLRQTRYGD ISWTVEAPPP PPSLEMSLGR QGWQMEPSPS SKEQTLLKCL RRPAGPTIFS  360
ALLTAKARAP DPGTGNQPRG TRQRSTTTIR APSSWELAVE AGPIRRRRLD EANPRAGPGR  420
VDPRARRRAH STLATGASRR TAAGPSVPLP AARTGNEARV DLAGRPAGGR ANWLLSWRRR  480
VGSSARSTV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025805465.1	1e-44	uncharacterized protein LOC112884302
TrEMBL	A0A0A9GQA6	3e-63	A0A0A9GQA6_ARUDO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP34560	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17695.1	2e-08	G2-like family protein