PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00039.1.g00280.1.am.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 138aa MW: 15220.4 Da PI: 10.8267

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00039.1.g00280.1.am.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.7	5.6e-05	32	49	2	19
HHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsa 19 r +h++ E+rRR++iN++ Zjn_sc00039.1.g00280.1.am.mkhc 32 RSKHSATEQRRRSKINDR 49 899*************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	1.7E-5	27	49	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 138 aa Download sequence Send to blast
MRGAFIELTV RVDRKGGSYS DGGTDQRPNT PRSKHSATEQ RRRSKINDRS TWASVLSREL 60 LVVYPPTLRN PPRHSHLLTP EQVISLHRWV VALKLLPMQP SGINLVAADD HPHFGSGPVA 120 HSFLPTILGG SSIPCTLC

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP762	37	128

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.3	4e-10	bHLH family protein