PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00039.1.g05450.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 199aa    MW: 21390.8 Da    PI: 7.951
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00039.1.g05450.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY37.44.9e-12661072058
                                   S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                          WRKY  20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                                   +p sYYrC ++   gC++kk  +r+++dp++++++Y g+H++
  Zjn_sc00039.1.g05450.1.am.mk  66 HPPSYYRCRHRhsqGCTAKKMAQRADDDPTLFDVIYYGTHTC 107
                                   799******988889*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081111.85342105IPR003657WRKY domain
SMARTSM007742.9E-952109IPR003657WRKY domain
SuperFamilySSF1182901.02E-1164107IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.9E-1166107IPR003657WRKY domain
PfamPF031063.6E-1266107IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MVTTSVRKVA RHADTGYERC WRGDTAPFPV ACGQVACAPP RSSTDRRRDL RAASGASLQR  60
TRPGGHPPSY YRCRHRHSQG CTAKKMAQRA DDDPTLFDVI YYGTHTCVDT TAATAGQVTA  120
PAPEHDPNTG TLPRRPCGGL IVKTEGLAAA TEPRNGNDNT TTPFCSTSAS PVSWCLSPAT  180
TSDIADEFFD IDVIANFFA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956613.17e-27probable WRKY transcription factor 70
TrEMBLA0A1E5WLZ77e-26A0A1E5WLZ7_9POAL; Putative WRKY transcription factor 53
STRINGSi030528m3e-26(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3171722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.17e-13WRKY DNA-binding protein 46