 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zjn_sc00044.1.g00070.1.am.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
WRKY |
| Protein Properties |
Length: 91aa MW: 10051.1 Da PI: 4.4196 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00044.1.g00070.1.am.mkhc | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 38.1 | 3e-12 | 70 | 91 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS
WRKY 1 ldDgynWrKYGqKevkgsefpr 22
ldDgy+WrKYGqK+vkg+++pr
Zjn_sc00044.1.g00070.1.am.mkhc 70 LDDGYRWRKYGQKVVKGNPNPR 91
59*******************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in starch synthesis (PubMed:12953112). Acts as a transcriptional activator in sugar signaling (PubMed:16167901). Interacts specifically with the SURE and W-box elements, but not with the SP8a element (PubMed:12953112). {ECO:0000269|PubMed:12953112, ECO:0000269|PubMed:16167901}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by sugar. {ECO:0000269|PubMed:12953112}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT054888 | 8e-84 | BT054888.1 Zea mays full-length cDNA clone ZM_BFc0109P23 mRNA, complete cds. |
| GenBank | BT061714 | 8e-84 | BT061714.1 Zea mays full-length cDNA clone ZM_BFb0176N11 mRNA, complete cds. |
| GenBank | KJ727861 | 8e-84 | KJ727861.1 Zea mays clone pUT5953 WRKY transcription factor (WRKY1) mRNA, partial cds. |
