PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00045.1.g00360.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TALE
Protein Properties Length: 537aa    MW: 57251.9 Da    PI: 6.5088
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00045.1.g00360.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox25.42.3e-084194561954
                                   HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                      Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                                   Fe   ++yp+ +++  LA++ gLt +qV++WF N R +
  Zjn_sc00045.1.g00360.1.am.mk 419 FEHflKPYPDDHTKDVLAARSGLTRNQVSNWFINARVR 456
                                   5544589*****************************88 PP
2BELL39.51.4e-13282351470
                          BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeava...glgsakpYtslAlkaiSrhFrcLkdaiae 70 
                                   e q+ ++ Ll++l+++d++Y+q+ +++q   + F++ +   g g+a++ + +A +a+S  +  L+ +ia+
  Zjn_sc00045.1.g00360.1.am.mk 282 EAQRVRTDLLEMLQMLDQKYNQCLDEVQSTTAKFNTLMrqgGAGHATICAPFAHRAVSAMYHGLRRRIAG 351
                                   6788899*****************************9867688999**********************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005746.2E-5205351IPR006563POX domain
PfamPF075261.0E-23210350IPR006563POX domain
PROSITE profilePS5007110.738397460IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.3E-24400473IPR009057Homeodomain-like
SMARTSM003899.1E-7400464IPR001356Homeobox domain
CDDcd000862.81E-11400461No hitNo description
SuperFamilySSF466892.35E-15402468IPR009057Homeodomain-like
PfamPF059206.1E-15417456IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    Send to blast
MASNPSTFPQ LGLEAINNGY FMAGNIIGGG GMMSADVTQF HPSMLLDHGG LGLGFGLGGA  60
AVTVAELGAQ FATNNVMLAA FANQLSAAAP ARSEEMDCGF DVAGGDSATY GMIWNGASDR  120
SGTVSALEPY LVELPDAARF HFPLETYGGG PSAPATSELS LTLCSKSSSD SVLNTADQCS  180
SGANSRSALT ELPQASFVRS RSTPAPFAAV VARSRYAAVA QEVLNDVMGC LLGGVADVAA  240
ESGSGGAWPL GWSVDASSAV SSNRLVASSE DGGDVAGARA GEAQRVRTDL LEMLQMLDQK  300
YNQCLDEVQS TTAKFNTLMR QGGAGHATIC APFAHRAVSA MYHGLRRRIA GAVMAAGSRP  360
TCWGESSSAT AGDMEWSWES AVIQKHWVAQ KARRGEQPCW RPQRGLPERS VAVLKAWMFE  420
HFLKPYPDDH TKDVLAARSG LTRNQVSNWF INARVRIWKP MIEEMYKDLK RSSAGEQGME  480
MEPQQIMSRA IRTKAVVRGL LLQQIFVCDT ARTAALCSEL VLRLVTSPHG PFLFLFF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025796845.10.0homeobox protein ATH1-like
TrEMBLA0A0A9NF720.0A0A0A9NF72_ARUDO; Uncharacterized protein
STRINGPavir.Ab00820.1.p1e-177(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31433365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32980.12e-50homeobox gene 1