PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00047.1.g01010.1.am.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family CPP
Protein Properties Length: 139aa    MW: 14891.8 Da    PI: 5.6294
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00047.1.g01010.1.am.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR24.36.3e-0845691641
                             TCR 16 kYCeCfaagkkCseeCkCedCkNkee 41
                                     YCeCfaa+++C+  C+C++C N+ e
  Zjn_sc00047.1.g01010.1.am.mkhc 45 TYCECFAAQVYCDG-CNCSNCGNNIE 69
                                    6*************.********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036381.5E-54567IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
GRNQEQPKLA APAEAGEIPA VAPEQRPATP AVPATRPWPV VFTPTYCECF AAQVYCDGCN  60
CSNCGNNIEN ENMRKEAIET LLTRCDGHNA AHSPSKSFTP IFRSPLANTI HLSDIKDAVM  120
QMVTACRNQA EACTATAGT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003571196.18e-19protein tesmin/TSO1-like CXC 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2743022