PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00051.1.g01760.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 378aa MW: 41512.2 Da PI: 4.5495

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00051.1.g01760.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	41.2	5.1e-13	53	187	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgkrkn 75 f F P+d lv + L++k++++++ + +++ d++++ P++L + + +++ ++yfFs+++ a+ ++++ Zjn_sc00051.1.g01760.1.am.mk 53 FTFTPSDARLV-DSLRAKIANQEVAHAVYFRDDDVCSLRPEELVRrhgkparvnpREAGDGLQYYFFSPAHFVGASRTKRS 132 89*******.77*****888566**********744677775543222234488*999998888888 PP NAM 76 ra....tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 r+ k+ +W+a + k+v + + L ++ + + +k W+m ey++ Zjn_sc00051.1.g01760.1.am.mk 133 RIiegtEKKETWHAETSLKQVEG--AVDGFMMVKLSYHVKIGEIVQKPGWLMTEYSF 187 8644433478899999977..666778888988888899********86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	14.051	49	201	IPR003441	NAC domain
SuperFamily	SSF101941	4.05E-15	51	201	IPR003441	NAC domain
Pfam	PF02365	2.5E-8	53	186	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence Send to blast
LPRIQINRYS RHPSSPPPIS PRTPPCFAPS NSIAAVSPEI MAALGAAADD DSFTFTPSDA 60 RLVDSLRAKI ANQEVAHAVY FRDDDVCSLR PEELVRRHGK PARVNPREAG DGLQYYFFSP 120 AHFVGASRTK RSRIIEGTEK KETWHAETSL KQVEGAVDGF MMVKLSYHVK IGEIVQKPGW 180 LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA PSSSSAGKRK AEDDLEGETS SMRQRHENVA 240 APEFAEHVEE SQPEPQIAPA TFEFDGNITF TLEELTNFPT GDVHTGFGAL TDGEAIAAYA 300 SGGTIDELIP STMEEVQPES EVPPASTDGS MTFEELWQLL DTDVVDDGAY LQLPADEILA 360 EEWLKDKETL QHVPLSDF

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence Send to blast

LPRIQINRYS RHPSSPPPIS PRTPPCFAPS NSIAAVSPEI MAALGAAADD DSFTFTPSDA  60
RLVDSLRAKI ANQEVAHAVY FRDDDVCSLR PEELVRRHGK PARVNPREAG DGLQYYFFSP  120
AHFVGASRTK RSRIIEGTEK KETWHAETSL KQVEGAVDGF MMVKLSYHVK IGEIVQKPGW  180
LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA PSSSSAGKRK AEDDLEGETS SMRQRHENVA  240
APEFAEHVEE SQPEPQIAPA TFEFDGNITF TLEELTNFPT GDVHTGFGAL TDGEAIAAYA  300
SGGTIDELIP STMEEVQPES EVPPASTDGS MTFEELWQLL DTDVVDDGAY LQLPADEILA  360
EEWLKDKETL QHVPLSDF

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45