PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00054.1.g00150.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 220aa    MW: 24045.1 Da    PI: 7.9814
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00054.1.g00150.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.21.5e-101660247
                           NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL 47
                                  ++G++F+Ptd+e+vv+yL+ ++ + +l+   +i++ di++++P+dL
  Zjn_sc00054.1.g00150.1.am.mk 16 AQGYKFNPTDQEIVVRYLRCRAVNCQLPS-AIIADRDILDHHPSDL 60
                                  68**********************99999.78*************9 PP
2NAM30.41.1e-096390101128
                           NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                                   g+k+tLvfy+g+ p+ge+tdWvm ey+l
  Zjn_sc00054.1.g00150.1.am.mk  63 GIKRTLVFYHGKPPSGERTDWVMWEYSL 90 
                                   89************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.8431154IPR003441NAC domain
SuperFamilySSF1019411.31E-2212100IPR003441NAC domain
PfamPF023654.3E-81790IPR003441NAC domain
SuperFamilySSF1019411.31E-22142154IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MAASIPLASG ATIPLAQGYK FNPTDQEIVV RYLRCRAVNC QLPSAIIADR DILDHHPSDL  60
VPGIKRTLVF YHGKPPSGER TDWVMWEYSL AGRGLSPYRV IMPCTNNNSG QLNGIVKEHE  120
DPSVTFSATA PSIENANIML NPDSSWVVCR IHKKRARKSP LIIRANNNAG AEKIPFYDFL  180
GQGNHYEGTA SSSVPPVEKE NSEVQNKGGS SENASTKDGI
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44822369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.18e-16NAC domain containing protein 83