PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00062.1.g00160.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family HB-other
Protein Properties Length: 257aa    MW: 27206.2 Da    PI: 10.5314
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00062.1.g00160.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox14.56.2e-051591861845
                                   HHHHSSS--HHHHHHHHHHCTS-HHHHH CS
                      Homeobox  18 lFeknrypsaeereeLAkklgLterqVk 45 
                                    F+ + +p+ e+r  LA+k+g++ +qVk
  Zjn_sc00062.1.g00160.1.am.mk 159 SFKWCAHPDDEARMALAMKIGMEPTQVK 186
                                   79999**********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000860.00443157186No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
LSSLPVHALD RLPSHDRHSA HARIHLEKKA LLVVTLISRK GPPLSSPQEL YATPPLTGSR  60
PPSPSHPPPL DGPSLPPPAT PLVAAALPSP AAPLVGPTIH PLAGPPSPSP ASRPHPTSLG  120
RSPRPSLSSS PSRPLTGPRP PSTSCPPHHR PRPPPHKHSF KWCAHPDDEA RMALAMKIGM  180
EPTQVKHLSM MTQPVTPSST STHRSRLQLP ELDTVAQTDA GLPKVNMTTG DDAMVGLDDP  240
TVMTFKPLNA CSQLQSS