PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00066.1.g03530.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 340aa    MW: 36715.3 Da    PI: 10.2827
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00066.1.g03530.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57343.96.4e-14154221369
                        DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkv 69 
                                   +q+ ws+ De +lL + +df+++tg  p   d+ +++e + +sis ++ +  +  K++rLK Kf++  
  Zjn_sc00066.1.g03530.1.sm.mk 154 AQKHWSDADEFTLLNAALDFRKRTGRVPRLpDMAKLFESITDSISPEIDQWMVYYKLKRLKSKFQHTD 221
                                   6899**********************77766*********************************9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045048.2E-12155221IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MSTERSAASA MDADAEPSPP SPPRSKKPAS RTGDGQSSPN PSPGGSPAGR SDQKRRRLRT  60
SAESAALALA SVAAHASAAN VDADANRAAA KRRGPAGVRV DEGHGAIQML GAAAARVDRG  120
QTDVQKHGPA EGPVTRGRAA GHKPGTAYAS RGAAQKHWSD ADEFTLLNAA LDFRKRTGRV  180
PRLPDMAKLF ESITDSISPE IDQWMVYYKL KRLKSKFQHT DGPSDRRLRD LCADLWGVVP  240
PNDISDGETD SDERRAAPDA AAMMPVVAEV LGEYWRMNAR AMERVPLEKG LSRLGKKQGR  300
LMETKWRQQL DEEMQTQMRR HDLAKEVCSL LSGAIKGLGP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15357KRRRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004954046.21e-115uncharacterized protein LOC101785158
TrEMBLA0A0A8YJH91e-121A0A0A8YJH9_ARUDO; Uncharacterized protein
STRINGSi017925m1e-116(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00238.13e-07DNA-binding storekeeper protein-related transcriptional regulator