PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00089.1.g00940.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ARR-B
Protein Properties Length: 203aa    MW: 22809.5 Da    PI: 10.2104
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00089.1.g00940.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like21.35.9e-0799123227
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekA 27 
                                   +r +W+ e H++Fve+v+qL G + A
  Zjn_sc00089.1.g00940.1.am.mk  99 KRFQWSGERHRKFVEVVKQL-GMDSA 123
                                   799*****************.77776 PP
2Response_reg259.5e-101286175
                                  EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH...ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEE CS
                  Response_reg  1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd...pDlillDiempgmdGlellkeireeepklpii 75
                                  vl vdD+ + ++l+ + l++ +y +v++a ++e ale+l++++    D   + + mp+mdG++ll+   + e+++p+i
  Zjn_sc00089.1.g00940.1.am.mk 12 VLAVDDDGVSLMLISRQLQHCKY-NVTTAMHAEMALEILRARRdhgADQFHM-VHMPEMDGFKLLEIV-SLEMDIPVI 86
                                  799********************.***************8888777776666.79*********9754.445577776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521722.85E-12886IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.5E-14999No hitNo description
PROSITE profilePS5011012.75111141IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.3E-61286IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.94E-91386No hitNo description
Gene3DG3DSA:1.10.10.608.4E-7100125IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MDADEFRSRL RVLAVDDDGV SLMLISRQLQ HCKYNVTTAM HAEMALEILR ARRDHGADQF  60
HMVHMPEMDG FKLLEIVSLE MDIPVIRKDK KKTSAPKRKR FQWSGERHRK FVEVVKQLGM  120
DSASSNPFAR LNSSAAFGKQ SLLPTQSVQL MTQRNLGNPL KDMGPVGYGG NMPQVAAPGS  180
HHTMCLLVEL KVAQLISKQL VSN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021305574.15e-33two-component response regulator ORR25
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1204346
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.11e-21response regulator 1