PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00092.1.g00100.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 224aa    MW: 24813.6 Da    PI: 4.9822
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00092.1.g00100.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.61.3e-111310534127
                           NAM  34 ikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykg 111
                                   +++    +++Pw+L +   ++ ++    fF  rd++ ++ +r++r    g+Wk +  d++vl   +++  ++++ L +   
  Zjn_sc00092.1.g00100.1.sm.mk  13 VEDNTAANTQPWKLLRnhGLSDDDVPAAFFYVRDESRPNARRSHRCDGGGTWKIQKCDRHVLLVgGENIRWTRNNLNLNMD 93 
                                   455578899*****74123333444568888899999************************9994555688999***9843 PP

                           NAM 112 rapkgektdWvmheyr 127
                                   +     +  Wvmhey 
  Zjn_sc00092.1.g00100.1.sm.mk  94 SG----SIGWVMHEYF 105
                                   33....578******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.5471123IPR003441NAC domain
SuperFamilySSF1019412.48E-1413112IPR003441NAC domain
PfamPF023653.0E-523104IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MALAFGGRLG VIVEDNTAAN TQPWKLLRNH GLSDDDVPAA FFYVRDESRP NARRSHRCDG  60
GGTWKIQKCD RHVLLVGGEN IRWTRNNLNL NMDSGSIGWV MHEYFIDDRP SLKVCLICFS  120
GYGKKRARHP DDSCLADEPK SQRLRVAAGS DGGSADCTTT TLIDQNLSTA YALEDSSAGL  180
DLENIFSDGE LQKLKDSFDA AESFLLSDDN EEQPPARMVK QKSD
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.13e-07NAC domain containing protein 45