PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00096.1.g00440.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 99aa    MW: 11095.7 Da    PI: 9.2094
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00096.1.g00440.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.21.7e-1997956128
                           NAM  56 kewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128
                                    ewyfF++++++   ++ +nrat sgyW+   ++   +++++e +g+kktLvfy+g  pk + kt+W+m ey l
  Zjn_sc00096.1.g00440.1.am.mk   9 AEWYFFCPTEST---STSSNRATGSGYWQVISTNAIRKHATSEIIGIKKTLVFYRGPMPKsSIKTHWIMSEYCL 79 
                                   59******9875...5789**********988866666669999************6655156*********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.253199IPR003441NAC domain
SuperFamilySSF1019419.94E-191084IPR003441NAC domain
PfamPF023655.3E-141179IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    Send to blast
MAMSSLALAE WYFFCPTEST STSSNRATGS GYWQVISTNA IRKHATSEII GIKKTLVFYR  60
GPMPKSSIKT HWIMSEYCLP PGSHVPPLDY PHHSTCTRN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003557998.17e-16NAC transcription factor NAM-B1
TrEMBLI1H5X22e-14I1H5X2_BRADI; Uncharacterized protein
STRINGBRADI1G63600.13e-15(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3569034
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.13e-18NAC domain containing protein 35