PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00103.1.g00930.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 329aa    MW: 36117.4 Da    PI: 7.715
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00103.1.g00930.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.72e-3290146259
                                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                     dDgynWrKYGqK+vkg e+prsYY+Ct+++Cpvkkkversa d+++++i+Y+g+Hnh+
  Zjn_sc00103.1.g00930.1.sm.mkhc  90 DDGYNWRKYGQKVVKGGEYPRSYYKCTHSSCPVKKKVERSA-DGQITQIIYRGQHNHH 146
                                     8****************************************.***************7 PP
2WRKY46.76.4e-152663042159
                                     -EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY  21 prsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                      +sYY+Ct++gC vkk++ers++dpk+v++tYeg+H h+
  Zjn_sc00103.1.g00930.1.sm.mkhc 266 RKSYYKCTYQGCDVKKHIERSSQDPKAVITTYEGKHSHD 304
                                     469***********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-2981148IPR003657WRKY domain
PROSITE profilePS5081124.69684148IPR003657WRKY domain
SuperFamilySSF1182903.66E-2687148IPR003657WRKY domain
SMARTSM007745.9E-3489147IPR003657WRKY domain
PfamPF031067.7E-2590146IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.0E-18246306IPR003657WRKY domain
SuperFamilySSF1182906.93E-18251306IPR003657WRKY domain
PROSITE profilePS5081123.238254306IPR003657WRKY domain
SMARTSM007747.1E-19259305IPR003657WRKY domain
PfamPF031061.1E-9266304IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MSHQQALAQV TAQAVHSPYN IVNQTDYSVP FSSTTTPPLT SQNVNSSANL VSTSTKMVPT  60
QPSHTGNTNI QSNEISQLQN SALTADKPAD DGYNWRKYGQ KVVKGGEYPR SYYKCTHSSC  120
PVKKKVERSA DGQITQIIYR GQHNHHRPPK RRSKDGGELL NNGDDFDEKN KDAQTRSEPG  180
IHDHSGKVEA SSDGPAGPSM SKRGEGSEPL SGSSDSEDDA DDEARADRGD AGPANANRRR  240
VPTPAQRIIV QTNSEVDLLD DGYRWRKSYY KCTYQGCDVK KHIERSSQDP KAVITTYEGK  300
HSHDVPAARN SSHAAANVIF NALDISYLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-2590307878Probable WRKY transcription factor 4
2lex_A7e-2590307878Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146151RPPKRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002467677.21e-178probable WRKY transcription factor 4
TrEMBLC5WVP71e-175C5WVP7_SORBI; Uncharacterized protein
STRINGSb01g032120.11e-175(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP134538122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.17e-71WRKY DNA-binding protein 3