PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00105.1.g00260.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TALE
Protein Properties Length: 612aa    MW: 67746.1 Da    PI: 5.7093
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00105.1.g00260.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox25.81.8e-083764092154
                                     HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                        Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                                      ++yp+ +e+  LA+++gLt +q+++WF N R +
  Zjn_sc00105.1.g00260.1.sm.mkhc 376 FQQYPKDSEKLMLARQTGLTRSQISNWFINARVR 409
                                     589*****************************88 PP
2BELL120.85.8e-39269340172
                            BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                                     e+qelq+k akL+ +l+eVd++Yk+y++q+q+v+ssF++vag g+akpYt++Al++iSrhFrcLkdai +qi
  Zjn_sc00105.1.g00260.1.sm.mkhc 269 EKQELQNKMAKLMAMLDEVDRKYKHYYHQMQAVVSSFDMVAGPGAAKPYTAVALQTISRHFRCLKDAINDQI 340
                                     689*******************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.2E-57194338IPR006563POX domain
PfamPF075269.1E-52200336IPR006563POX domain
SMARTSM003893.5E-7358417IPR001356Homeobox domain
CDDcd000862.53E-10361414No hitNo description
PROSITE profilePS5007111.289370413IPR001356Homeobox domain
SuperFamilySSF466891.11E-12375419IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.1E-18376419IPR009057Homeodomain-like
PfamPF059204.3E-12379409IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 612 aa     Download sequence    Send to blast
MATYYSSPGG ERDSQNMYSR DPGSASYPMS SALGNLLYLN NPTPGPYMEF SGVLQSQQNC  60
MDMPEPGHTS VMSQDSSARE SDMLGSHQGQ HTFNSVKDMK NEILMQMMDG SQSSTADFIH  120
GDAHNGAQLE FGVLNNHSSS NAPSVQGQGL SLSLNTQILA PSLPYWSVKP DMLSPHSYHD  180
SLRVDDIRMK SMQSEASRAI RNSRYLKAAQ ELLDEVVNVW KNIKQKAQKE QVDTGRTDGK  240
ETEGEPTEGV SSNPKESAAS AAPELSTAEK QELQNKMAKL MAMLDEVDRK YKHYYHQMQA  300
VVSSFDMVAG PGAAKPYTAV ALQTISRHFR CLKDAINDQI NVIRKKLGEE ESTSGKEGKL  360
TRLRYIDQHL RQQRAFQQYP KDSEKLMLAR QTGLTRSQIS NWFINARVRL WKPMIEDMYK  420
EEIGDIEQDS NSSSDNASRS KGKVASSEDK EDLKSSRPRV CETSQLSESR SSIGTANVGG  480
APVGFQNEAN PDDSFMNLMM KDQRPNEADG GLLHNAVAHH PDENARFMAY HLAELGRYGN  540
GNVSLTLGLQ HSSSNLSAPN AQQSFPVAGD NDIYNATAPL GVNISSSDYE SMNQIDQQQR  600
FEQSPLLHDF VA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004963319.10.0BEL1-like homeodomain protein 7
RefseqXP_004963320.10.0BEL1-like homeodomain protein 7
RefseqXP_004963321.10.0BEL1-like homeodomain protein 7
TrEMBLK3Z4G80.0K3Z4G8_SETIT; Uncharacterized protein
STRINGSi021437m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP90138131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.12e-88BEL1-like homeodomain 7