PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00105.1.g01550.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family CPP
Protein Properties Length: 241aa    MW: 26713.3 Da    PI: 7.0089
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00105.1.g01550.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR32.41.8e-10116137425
                             TCR   4 kgCnCkkskClkkYCeCfaagk 25 
                                     ++CnCkks ClkkYC+C+++++
  Zjn_sc00105.1.g01550.1.sm.mkhc 116 RKCNCKKSGCLKKYCDCYQETQ 137
                                     79*****************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036383.3E-7116137IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MEPAPDPQVA EDVPEALEPE PAGSDPDDAE RAVPPPPPPA PAPTPAPAPV PPTAASDATP  60
GPESFVPAAG LPPPQAEATG SFDRRKKSAT PPTLSFPFRL RHSELPLRSP MDIFRRKCNC  120
KKSGCLKKYC DCYQETQVGV EIQTMNGHLY PKPLTQVRPE SSSFQLTRRP GEEARREQWH  180
FSRKRSEDGI SDAMEGHNVI KFQRNNKKPE RHMYRFSIPR CIEVMNAMSE LSLIEKSLAP  240
D
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP96102834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25790.15e-07Tesmin/TSO1-like CXC domain-containing protein