PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00111.1.g00200.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 240aa    MW: 24067.9 Da    PI: 4.7556
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00111.1.g00200.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.2e-1774119756
                           AP2   7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                   r+++ +grW+AeIrdp++    +r++lg++ t+e+Aa+a++ a+++++g+
  Zjn_sc00111.1.g00200.1.am.mk  74 RRRP-WGRWAAEIRDPRK---GARVWLGTYATPEDAARAYDVAAREIRGA 119
                                   5667.**********954...4*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.56368126IPR001471AP2/ERF domain
PRINTSPR003674.4E-67081IPR001471AP2/ERF domain
SMARTSM003801.3E-2774132IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-1974127IPR016177DNA-binding domain
PfamPF008476.1E-1174118IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.6E-2874126IPR001471AP2/ERF domain
CDDcd000182.07E-1882128No hitNo description
PRINTSPR003674.4E-692108IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MCGGAIIADF VPAGARRPAG SSTTFSASSN ISGESSARAP GRRADAGDEA AGAGAQDGVP  60
WHPAPAVGPL GXXRRRPWGR WAAEIRDPRK GARVWLGTYA TPEDAARAYD VAAREIRGAK  120
AKLNFPPAMG TAGGGGSASG GKKRRKVAAG PAAAEESSGS SPAATIVVAA EAPADGGVPG  180
GGGEETLREC MSGLEAFLGL QDGAEEEGNH DVEAWERDDA DEPSVLPAAD CSGSLAGWTP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-17741341980Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141145KKRRK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9560724e-60EU956072.1 Zea mays clone 1556883 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004962330.14e-56ethylene-responsive transcription factor ERF071
TrEMBLA0A0A9TEE12e-64A0A0A9TEE1_ARUDO; Uncharacterized protein
STRINGPavir.J05942.1.p7e-58(Panicum virgatum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.16e-17ethylene-responsive element binding protein