PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00112.1.g00680.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 115aa    MW: 12846.4 Da    PI: 6.7493
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00112.1.g00680.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY45.61.4e-14865259
                                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                                  dD y+W   G   + g   p  +++C+ ++C+vkk v  s +  ++ve++Y+g+Hnh 
  Zjn_sc00112.1.g00680.1.am.mk  8 DDCYTWMNSGYQAIPGWGSPTIFFQCACENCMVKKSVTLSVDGRQIVETIYRGSHNHA 65
                                  8********************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081114.561267IPR003657WRKY domain
SuperFamilySSF1182903.53E-14567IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.7E-12767IPR003657WRKY domain
SMARTSM007741.1E-4766IPR003657WRKY domain
PfamPF031061.2E-10864IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    Send to blast
MSSLCSADDC YTWMNSGYQA IPGWGSPTIF FQCACENCMV KKSVTLSVDG RQIVETIYRG  60
SHNHARPSER LLRDVLTPFQ PNSQHNVLPD VSVDETSMRR ARKGGAKLQY SADDD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021320386.11e-22probable WRKY transcription factor 58 isoform X3
TrEMBLA0A1Z5R8G08e-20A0A1Z5R8G0_SORBI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3588534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07100.24e-17WRKY DNA-binding protein 26