PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00122.1.g00160.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 254aa    MW: 27069.5 Da    PI: 9.763
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00122.1.g00160.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_154.13.5e-17181232354
                                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                                   +++r +r++kNRe+A rsR+RK+a++ eLe++vk L++eN++L+ + e+l+ 
  Zjn_sc00122.1.g00160.1.am.mk 181 SDRRKKRMIKNRESAARSRARKQAYVRELEKEVKLLQQENQSLRVKYEQLRV 232
                                   689******************************************9999975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.9E-13179248IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.99181231IPR004827Basic-leucine zipper domain
PfamPF001702.4E-15182233IPR004827Basic-leucine zipper domain
CDDcd147071.32E-22183230No hitNo description
Gene3DG3DSA:1.20.5.1707.4E-15183234No hitNo description
SuperFamilySSF579591.75E-12183232No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
LWLGPGLLKP ASQPASRAPL WPCGAPLRAQ NKQGERSPTD RAPFGVMAAM DMDDDEDIWA  60
NSPSPSASPP RSAACGFIST QLSLNSHLHL LSSSAADAGG VHGGSPTDHS VGDGIFAADG  120
GFRHQAGVSG GFRNVAASSF FPYGVDAVPA PYDSDAARSA LEHEMCLGPA AAAWAGSVAG  180
SDRRKKRMIK NRESAARSRA RKQAYVRELE KEVKLLQQEN QSLRVKYEQL RVSVEVPVPT  240
PVKKTLRRMP SAPF
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF0937891e-63EF093789.1 Zea mays delayed flowering1 (DLF1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004957504.17e-80ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLK3ZWU51e-78K3ZWU5_SETIT; Uncharacterized protein
STRINGSi031077m3e-79(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97643044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.23e-12basic region/leucine zipper motif 27