PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00138.1.g00970.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 274aa    MW: 30502 Da    PI: 5.17
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00138.1.g00970.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.96e-17121422127
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk...kvka...eek.ewyfFskrdkkyatgkrk 74 
                                   ppG+ F+Ptdeel+ + L ++  gk+  +  + +++ +  +++Pw+L +          +++   +f+++ ++     +r+
  Zjn_sc00138.1.g00970.1.sm.mk  12 PPGLIFDPTDEELIEHCLLPRSLGKPDAFPGIiVEDNKSANTQPWKLFQnhvL--MpliDDQlPAFFYVRDERP--DARRS 88 
                                   8*************************7777773666699********633441..2343444355777777664..56799 PP

                           NAM  75 nratksgyWkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                   +r    g Wk + +    d++vl   ++e+ ++++ L f+  +     +  Wvm ey 
  Zjn_sc00138.1.g00970.1.sm.mk  89 RRCDGGGWWKIQKSeskdDRHVLIIdGREVRWTRNNLNFHLDSG----SVGWVMYEYF 142
                                   99999999*96655222355555445778899********5443....568******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-239156IPR003441NAC domain
PROSITE profilePS5100520.44311162IPR003441NAC domain
PfamPF023657.5E-1412141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MSPAQFLGDD HPPGLIFDPT DEELIEHCLL PRSLGKPDAF PGIIVEDNKS ANTQPWKLFQ  60
NHVLMPLIDD QLPAFFYVRD ERPDARRSRR CDGGGWWKIQ KSESKDDRHV LIIDGREVRW  120
TRNNLNFHLD SGSVGWVMYE YFIDDSPSLK VCRISFSGYS KKRARQLDGH GNGSLAGEPV  180
TQRRRVTDAA GSGPADSTTT STSLDQNLGT AHASEDQERH PSAFGMPAMP MPIHNSSAGL  240
DPVNIICDVE FQALLATADA AMAPFRVSFN HDEE
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-07NAC domain containing protein 2