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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zjn_sc00143.1.g00730.1.am.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
bHLH |
| Protein Properties |
Length: 87aa MW: 9659.92 Da PI: 9.5675 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00143.1.g00730.1.am.mkhc | genome | ZGD | View CDS |
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| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 23.3 | 1.1e-07 | 14 | 54 | 15 | 54 |
HHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
HLH 15 riNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54
+iN+ +++L++llP+a + +++ s L++++ +IksL
Zjn_sc00143.1.g00730.1.am.mkhc 14 EINELISRLQTLLPSARGRRGGSqASTTKLLKETCSHIKSL 54
7**************864444444888899**********9 PP
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| Functional Description ? help
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| Source |
Description |
| UniProt | Atypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of grain size. Binds the transcription repressor APG and forms a heterodimer of antagonistic basic helix-loop-helix transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea (By similarity). {ECO:0000250}. |
| UniProt | Atypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of grain size. Binds the transcription repressor APG and forms a heterodimer of antagonistic basic helix-loop-helix transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea. {ECO:0000269|PubMed:23136524}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU958159 | 3e-86 | EU958159.1 Zea mays clone 1675661 DNA binding protein mRNA, complete cds. |
