PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00147.1.g00300.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 473aa    MW: 52053.1 Da    PI: 10.0345
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00147.1.g00300.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.21.6e-322293691128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyat 70 
                                   lp+G++F+Ptd+el+ e+L+ k++ +       +   +    +i+   +i++++P++Lp  v ++    +fF++ +k+y+t
  Zjn_sc00147.1.g00300.1.am.mk 229 LPAGVKFDPTDQELL-EHLEGKARPDVcklhplI---DefipTIEGEnGICYTHPERLP-GVGKDGLIRHFFHRPSKAYTT 304
                                   799************.99****999984444332...143333665557**********.555555677************ PP

                           NAM  71 gkrknratk......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                                   g+rk+r+++      + +W++tgk+++v+s +g+l+g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  Zjn_sc00147.1.g00300.1.am.mk 305 GTRKRRKVHtgdqggETRWHKTGKTRPVFS-NGKLKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 369
                                   ******855345544667************.999***********6657999999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.2E-37219388IPR003441NAC domain
PROSITE profilePS5100533.064229388IPR003441NAC domain
PfamPF023651.3E-14230369IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MLVVIVPRLQ PLLGVSGSHV RSARTGFFFR RANPDRQWTS ASAISIDGHA ATYSRWWVSA  60
QRIDPAPRLV SGSREFAPCL RRSVRSSGQQ PKVARQRGKP APQYRTQLLP REHGRSIDRV  120
VCLACVAYRS FLRGSAASLA FAPYGGEEES VARRRGQAEA FLLLSDPLIV EEEDKVENNL  180
ATVAAIAAAK KQEQATSHVN LIRTCPSCGH RAQYEQMQAA ATIQDLPGLP AGVKFDPTDQ  240
ELLEHLEGKA RPDVCKLHPL IDEFIPTIEG ENGICYTHPE RLPGVGKDGL IRHFFHRPSK  300
AYTTGTRKRR KVHTGDQGGE TRWHKTGKTR PVFSNGKLKG YKKILVLYTN YGKQRKPEKT  360
NWVMHQYHLG PDEEEKDGEL VVSKVFYQTQ PRQCGGGGSM TTAKDAAPLP AATDHHQHDG  420
ANSMLKAPGI VDFYSPAALI SYNQAAPNSR AAASAHLIPN FEVHRAGAAG FGP
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1027940.0AK102794.1 Oryza sativa Japonica Group cDNA clone:J033108B03, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969491.10.0NAC domain-containing protein 73
TrEMBLK3XK781e-179K3XK78_SETIT; Uncharacterized protein
STRINGSi002301m1e-180(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP30753786
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-115NAC domain containing protein 73