PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00231.1.g00050.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GRAS
Protein Properties Length: 133aa    MW: 13811.9 Da    PI: 6.9398
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00231.1.g00050.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS22.71e-0762108248
                          GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteA 48 
                                   +++++ c+ a++ g+   a+a+L+ +s  asp gd ++R+a+ f+eA
  Zjn_sc00231.1.g00050.1.am.mk  62 KHVIMYCVAALDMGNVMTASAALQSISSVASPLGDHLKRVAFTFAEA 108
                                   7899******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035143.6E-562108IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MNPEGSNNNK GKAVVVVKEE PSSLPMLVDA ASPAVPPPLP AAPMANIPGP HQYGENRSLF  60
IKHVIMYCVA ALDMGNVMTA SAALQSISSV ASPLGDHLKR VAFTFAEAKI APGTVAHCLL  120
SGDSSQYVDT RGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.13e-08scarecrow-like 3