PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00316.1.g00030.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 209aa    MW: 22998 Da    PI: 8.297
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00316.1.g00030.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY47.43.8e-15141177235
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---E CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvk 35 
                                   +Dgy+WrKYG K+++g++f+rsY+rC+++   gC ++
  Zjn_sc00316.1.g00030.1.sm.mk 141 EDGYEWRKYGEKSINGAQFTRSYFRCAYKddtGCLAT 177
                                   7***************************977788775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-13131177IPR003657WRKY domain
SuperFamilySSF1182901.31E-13134179IPR003657WRKY domain
SMARTSM007744.9E-10140190IPR003657WRKY domain
PROSITE profilePS5081113.586141176IPR003657WRKY domain
PfamPF031064.0E-13141177IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MPVDDCDGAV REVAQVYELI KTKLPLFLLH HHGQQEPPLA QSLLSEALRA LNIALSAMTM  60
MQKRQQQREI SSSTTASPPV AVLKAKPQMS SPSAAPAAAG SGNGATTRTS ARSGKRRRSS  120
VTEGGKNSSS SWVNVTTVPY EDGYEWRKYG EKSINGAQFT RSYFRCAYKD DTGCLATNCN  180
ELDMAWIMAE SLMGDDPELQ LLYNTFKYY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004978333.12e-55probable WRKY transcription factor 54
RefseqXP_004978526.13e-55probable WRKY transcription factor 54
TrEMBLK3Y9146e-54K3Y914_SETIT; Uncharacterized protein
TrEMBLK3ZJB77e-54K3ZJB7_SETIT; Uncharacterized protein
STRINGSi010706m9e-55(Setaria italica)
STRINGSi026670m1e-54(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50452663
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.11e-10WRKY DNA-binding protein 30