PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00353.1.g00010.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 174aa    MW: 19776.2 Da    PI: 10.1949
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00353.1.g00010.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1095.7e-34151431128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lp+G++F+Ptd+++vv+yL+  + +++l+   +i++ di++ +PwdL     ++ +e yf  +r  ++a+g+  +ra+k+g
  Zjn_sc00353.1.g00010.1.sm.mk  15 LPRGYKFNPTDHDIVVRYLRCCAMNQPLPS-GIIADKDILDQNPWDLV---PETASEKYFLYRRIMRSANGTLWKRAAKDG 91 
                                   799*************************99.89**************5...3456799*********************** PP

                           NAM  82 yWkatgkdkevlsk....kgel...vglkktLvfykgrapkgektdWvmheyrl 128
                                   yW+ +gk+ +++++    +  +   vg+kktLvfy g+ p+g++tdWvm+ey+l
  Zjn_sc00353.1.g00010.1.sm.mk  92 YWRLSGKEVPIFCTwvmsR--VplmVGIKKTLVFYLGKPPTGKRTDWVMQEYHL 143
                                   ************9876531..2566****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.12E-3512148IPR003441NAC domain
PROSITE profilePS5100535.72915159IPR003441NAC domain
PfamPF023657.3E-1816143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MAASVPLATE ASIPLPRGYK FNPTDHDIVV RYLRCCAMNQ PLPSGIIADK DILDQNPWDL  60
VPETASEKYF LYRRIMRSAN GTLWKRAAKD GYWRLSGKEV PIFCTWVMSR VPLMVGIKKT  120
LVFYLGKPPT GKRTDWVMQE YHLAGGGLIP YRVVRSSMKH NLGEVSRTMK DVSK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-2691439140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025828753.13e-59NAC transcription factor NAM-B1-like
TrEMBLA0A2S3IE555e-58A0A2S3IE55_9POAL; Uncharacterized protein
STRINGSb05g004580.14e-57(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44822369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.14e-35NAC domain containing protein 83