PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc01252.1.g00010.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

ERF

Protein Properties

Length: 166aa MW: 17088 Da PI: 9.822

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc01252.1.g00010.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	22.3	3.2e-07	1	24	33	56
AP2 33 lgkfgtaeeAakaaiaarkklege 56 lg+f+t++ Aa+a++aa+++l+g+ Zjn_sc01252.1.g00010.1.am.mk 1 LGTFDTPKAAARAYDAAARRLRGP 24 79********************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51032	11.799	1	31	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	7.8E-12	1	32	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	5.1E-8	1	32	IPR016177	DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence Send to blast
LGTFDTPKAA ARAYDAAARR LRGPRAATNY PDAALPTPAT SVSGSSTTEL LDESSCSALA 60 PPPSLDLSLG LPTTVVVPSG EEARSDGSGS STSSSSVVDE PALSLGLDIN LTSALAARSN 120 GVDGGTKKKT GRRSWLARPD QTRGMSRRLT HQDSPPRPAV TRPTVF