PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc01585.1.g00010.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 202aa    MW: 22216.8 Da    PI: 4.9975
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc01585.1.g00010.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.41.6e-19102161159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   ++D ++WrKYGqKe+++s+fpr     t   gC ++++v++s+ dp+v  itY geH+++
  Zjn_sc01585.1.g00010.1.sm.mk 102 MEDDHAWRKYGQKEIRDSKFPRYGEALTEDqGCLARRRVQQSDADPSVYLITYFGEHTCS 161
                                   58********************888888878***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.5E-1996161IPR003657WRKY domain
PROSITE profilePS5081116.42197163IPR003657WRKY domain
SuperFamilySSF1182903.14E-1798162IPR003657WRKY domain
SMARTSM007746.8E-24102162IPR003657WRKY domain
PfamPF031061.5E-18103160IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MATKPASAAS ELIAKGRDST AVLQAILGQQ PAAVAEMPDG IWELTEQIIR CCDRALAALQ  60
EGAASGAKKR EPEEHVMDAP RSKRMRVSDG ERGITVEKKW TMEDDHAWRK YGQKEIRDSK  120
FPRYGEALTE DQGCLARRRV QQSDADPSVY LITYFGEHTC SCSRDTDEPP ASLVINFGSG  180
RTRDGQLPSG CSPWPSCDDD GL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-14101160768OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004980734.12e-61probable WRKY transcription factor 63
TrEMBLA0A2T7ECG04e-61A0A2T7ECG0_9POAL; Uncharacterized protein
TrEMBLK3ZLW23e-61K3ZLW2_SETIT; Uncharacterized protein
STRINGPavir.J07662.1.p2e-62(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP46632667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-17WRKY DNA-binding protein 70