PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc02557.1.g00010.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 102aa    MW: 12133.9 Da    PI: 8.7555
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc02557.1.g00010.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.62.2e-1457102147
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL 47 
                                   lppGfrF Ptdeel+ +yL++k+ + +++   +i+++d+++++PwdL
  Zjn_sc02557.1.g00010.1.am.mk  57 LPPGFRFFPTDEELIIFYLARKAVDASFTS-ATIRDIDLHSFDPWDL 102
                                   79*************************998.77*************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.41E-1749102IPR003441NAC domain
PROSITE profilePS5100519.84957102IPR003441NAC domain
PfamPF023653.3E-65893IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
LHHESPQAPH VTLNYQLFAV IKWTSSYLRC RVDRSSLRKF VCTRMLGEHH QRRMERLPPG  60
FRFFPTDEEL IIFYLARKAV DASFTSATIR DIDLHSFDPW DL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002444391.12e-19NAC domain-containing protein 83
TrEMBLC5YL796e-18C5YL79_SORBI; Uncharacterized protein
STRINGSb07g021200.19e-19(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4651522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.24e-17NAC domain containing protein 38