PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc04311.1.g00010.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GRAS
Protein Properties Length: 147aa    MW: 15533.1 Da    PI: 7.1642
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc04311.1.g00010.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS23.46.6e-082352345374
                          GRAS 345 ksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                                   ++ g+ v e +gsl lgW+drpL+sv+aWr
  Zjn_sc04311.1.g00010.1.am.mk  23 AGAGFGVLEGDGSLALGWHDRPLYSVTAWR 52 
                                   3689*************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035142.3E-52352IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
FGPRAHHLAT EQLPRLVTPS SLAGAGFGVL EGDGSLALGW HDRPLYSVTA WRAAGADAAG  60
AVIDTLQEVG RDDGNGRNGI RSSSTPPCDA THGHALTSCR CRAFCSFCSR QPQARTSQHA  120
AERPMNQEED EAQTVRRINH TTTAGAG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5UN447e-12A0A1E5UN44_9POAL; DELLA protein DWARF8