PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc04791.1.g00010.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 237aa MW: 26212.3 Da PI: 6.5996

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc04791.1.g00010.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	38.6	3.1e-12	33	160	4	116
NAM 4 GfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat 70 f F P++ l+++yL+kkv+g + l + +++ d++++ P L + + +++ ++ yfF+k++ ++ Zjn_sc04791.1.g00010.1.am.mk 33 SFSFCPSNALLINHYLRKKVDGADvfsdLANAAYFHDEDVCSARPDVLVRahtiparvpsREAGDGQQFYFFTKARFIGNK 113 589*******************8865333345**********744677776664323355577888887755544 PP NAM 71 ...gkrknratk.sgyWkatgkdkevlskkgelvglkktLvfykgrapkg 116 +r+ + t + +W+a g+ k+v ++ g + L ++ ++ pk+ Zjn_sc04791.1.g00010.1.am.mk 114 lnmRSRTIKNTGdKETWHAEGSAKPVDG---TADGYMTKLSYHVKTGPKT 160 1013344443334778*******965...5678888888886555554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.22E-13	30	161	IPR003441	NAC domain
PROSITE profile	PS51005	13.601	30	197	IPR003441	NAC domain
Pfam	PF02365	6.1E-8	34	160	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence Send to blast
TESSKSPPSP TICRRCSNSP PTRPIEMAAM DDSFSFCPSN ALLINHYLRK KVDGADVFSD 60 LANAAYFHDE DVCSARPDVL VRAHTIPARV PSREAGDGQQ FYFFTKARFI GNKLNMRSRT 120 IKNTGDKETW HAEGSAKPVD GTADGYMTKL SYHVKTGPKT DHQHAAVLEF GAERSQLMQD 180 MPANSNSNGA LEHIDWSWFM PESEAERSQP HLAKPASSGS NVTLEDIKLW ANLLLAD

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45