PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00014.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 267aa MW: 27650 Da PI: 8.2679

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00014.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	85.7	4.4e-27	82	123	4	45
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGa 45 + +cprC s++tkfCyynny++sqPr+fC+aCrryWt GG Zmw_sc00014.1.g00050.1.am.mk 82 QGEQCPRCASHDTKFCYYNNYNTSQPRHFCRACRRYWTLGGG 123 5679***********************************995 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.3E-23	83	123	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	21.996	84	138	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-15	85	118	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	86	122	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence Send to blast
MAGQVMEAPL HQQAPVSLAQ LQANDKICDH LGTPAAATMS ASVSCGAATT TAAEMAYLRQ 60 IQLQQAADAN NSNNGNGGGG SQGEQCPRCA SHDTKFCYYN NYNTSQPRHF CRACRRYWTL 120 GGGAAGLGST SASGSPCRAV QPSAALARCR VSASGVGLGA RLLDSDSVDV WKAPGVGAAM 180 WPEFSAAAAP PQTSGLLHGG VQLIGCRANS RAEDVATRVG RPNNNKRIGV TLLTTSKEIM 240 QPSPSVLGHI GATTDAYEID QKPVLVH

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367