PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00049.1.g00270.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 245aa    MW: 27723.8 Da    PI: 9.1038
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00049.1.g00270.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.21.5e-11122163351
                             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                                      +GV++  k+ +W A I++      +k+++lg+ gt +eAa+++++a+ 
  Zmw_sc00049.1.g00270.1.sm.mkhc 122 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQDEAARLYDRAAF 163
                                     79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.96697176IPR001471AP2/ERF domain
PfamPF008478.2E-6121164IPR001471AP2/ERF domain
SMARTSM003803.2E-4121178IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-8121166IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.9E-6124168IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MLSINFFLMY MLFPYNPDSI AGGISSMVSL RRRRLLGLCS GKYSLPVDLP KPIDDVEPVH  60
SNAKPFSVHP LPLTEICNVL VDSPSGMDSF KEEIKQYYPG KEIKRRKRHR RKQYVDQEPC  120
IMRGVYFKNM KWQAAIKVDK KQIHLGTVGT QDEAARLYDR AAFMCGREPN FELSEEVKQE  180
LQKYTWEEFL AKTRNAITSK KQRKAGLLRC SKAELVMGQS DGDTEMINGG GSSNSDSGDA  240
ENSAA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001151501.11e-121uncharacterized protein LOC100285135
TrEMBLC0P9B01e-119C0P9B0_MAIZE; Ethylene-responsive transcription factor-like protein
STRINGPavir.Aa01947.1.p1e-116(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75163545