PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00063.1.g00130.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 388aa MW: 42008.6 Da PI: 4.3359

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00063.1.g00130.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	59.9	4.5e-19	299	349	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++++ d++ yF+lp+++A+k+L+vc TvLK R++G+kRWP+R i+++ Zmw_sc00063.1.g00130.1.am.mk 299 TSNLERRDIACYFHLPMEEACKKLQVCGTVLKGVSRKFGLKRWPYRTINKI 349 68999*******************************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	14.845	289	370	IPR003035	RWP-RK domain
Pfam	PF02042	2.0E-17	301	349	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence Send to blast
MAANGDNNDH GAEGQWLFDP LLVPDDLDDV MHLLNVPTDD DQYSPPQPAS TQNVATDGSY 60 SGNPLDGTAM AGNVGAYSSV DSTAHPAAVT AMAGGSSTNQ DVGASSSYVH QGVLDCTGCQ 120 MLREIMHIKG LETTKLCIHG VPGLFYHATL EVYHANNEGL ALEPTHQSFV DFIARDYAWV 180 KHYLIEYAQK RAAGGYTVVH DSTSDFLDVL CTSMAGVCVH ADDNGDVAAP AEAENGVAVD 240 EQIVPADAGD AVQPMIAQEE ILPDEPGPSE LRNDAVDDQE EQVVQPHARS TLAIQRERTS 300 NLERRDIACY FHLPMEEACK KLQVCGTVLK GVSRKFGLKR WPYRTINKID NKIAKLRENG 360 DGSAESMAEI QKLTDSRREI IDGPSEEI

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence Send to blast

MAANGDNNDH GAEGQWLFDP LLVPDDLDDV MHLLNVPTDD DQYSPPQPAS TQNVATDGSY  60
SGNPLDGTAM AGNVGAYSSV DSTAHPAAVT AMAGGSSTNQ DVGASSSYVH QGVLDCTGCQ  120
MLREIMHIKG LETTKLCIHG VPGLFYHATL EVYHANNEGL ALEPTHQSFV DFIARDYAWV  180
KHYLIEYAQK RAAGGYTVVH DSTSDFLDVL CTSMAGVCVH ADDNGDVAAP AEAENGVAVD  240
EQIVPADAGD AVQPMIAQEE ILPDEPGPSE LRNDAVDDQE EQVVQPHARS TLAIQRERTS  300
NLERRDIACY FHLPMEEACK KLQVCGTVLK GVSRKFGLKR WPYRTINKID NKIAKLRENG  360
DGSAESMAEI QKLTDSRREI IDGPSEEI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021321666.1	2e-85	uncharacterized protein LOC8084238
TrEMBL	A0A368QD38	8e-97	A0A368QD38_SETIT; Uncharacterized protein
STRING	Si025242m	6e-87	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8055	29	44