PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00064.1.g00150.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 317aa    MW: 34919.1 Da    PI: 5.1009
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00064.1.g00150.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-09137192454
                                   HHHHHHHHHHHHHHHHHHHHHCTSCC.C.......TTS-STCHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPk.as....kapskKlsKaeiLekAveYIksL 54 
                                    h ++Er+RR+++ + f++L +++P        ++ +   +K++ L  ++eY+++L
  Zmw_sc00064.1.g00150.1.am.mk 137 EHVIAERKRREKMHHQFATLASIVPDiTKwmmlSEFNLQTDKVSLLDSTIEYVHKL 192
                                   6999**********************666************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.72E-13129205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.83133192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-12137206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.6E-7137192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.11E-9138197No hitNo description
SMARTSM003533.9E-10139198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516718.543249317IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MESANHQWLQ ELESDDEGEL ELINPLSMQK LAESLANELW GQPQEQQDNQ QEQCGYRSPS  60
LTGSHFVGHA NSTNRTTISS GVSNNMSPFT EASSSPVNLA AKEYTQQGVY STTTVKCCSS  120
SMTAKGGARR STSSVQEHVI AERKRREKMH HQFATLASIV PDITKWMMLS EFNLQTDKVS  180
LLDSTIEYVH KLRDRLKALQ DELQTTGSNT EESPAFDADC CVAGSKPNDG GDEAVSPKIE  240
VDVRGTTLLL RLVCREKKGV LLTVLMELEK HRISIVNTNV VPFAESSLNI TITAQMDNGS  300
STTTELVKAL NLALRNI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141146ERKRRE
2142147RKRREK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022685471.11e-108transcription factor bHLH19-like
TrEMBLK4ACR61e-107K4ACR6_SETIT; Uncharacterized protein
STRINGSi036673m1e-107(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP138961725