PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00069.1.g00060.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 445aa    MW: 47581 Da    PI: 7.7121
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00069.1.g00060.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.91.6e-26260319258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                                   dDgy+WrKYGqK++ gs++prsYYrCt++   gC++kkkv+r ++dp + e+tY g+H++
  Zmw_sc00069.1.g00060.1.am.mk 260 DDGYTWRKYGQKDILGSRYPRSYYRCTHKtyyGCEAKKKVQRLDDDPFTYEVTYCGNHTC 319
                                   8***************************9999**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.9E-26255319IPR003657WRKY domain
SuperFamilySSF1182904.71E-24257319IPR003657WRKY domain
SMARTSM007741.2E-36259321IPR003657WRKY domain
PROSITE profilePS5081122.068260317IPR003657WRKY domain
PfamPF031061.4E-24260319IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MTNDPFRSFF RSYRIKERQI ASSPASPSEA SQTPLFMQVL AGHPHPQHPF TLDHLRGSVN  60
INQKITGDEL LGQLGAMDDV LSQIHEAFQL ASQLMQELSG GQNDPAYLAE RCHGIARAYA  120
AAIRMLQPHG RTEVGATQLP PPSASDLLRQ WRPDHREAGG TAANNPFLGS SPSAQLGHLL  180
EPSSFHTLAE AFGATRAHEM VRTGADVAGT SGGPVRRVAP SSRGSPPIQP RQGRRRESGE  240
RRTVMVPAHR AGGDTDQPPD DGYTWRKYGQ KDILGSRYPR SYYRCTHKTY YGCEAKKKVQ  300
RLDDDPFTYE VTYCGNHTCL TSTTPLLTLP ATATTDAVTT NSPTSSGAIL AQDLAVVTAE  360
RHPAPALSTA IQLGMSSMPS SLVGASSSAG GGGEGNGAPA NVPISGTGRE MEYPVMDLAD  420
AMFNSGSSGG SSMDAIFASP RPRDR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-21260319968OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022681211.11e-119probable WRKY transcription factor 53
TrEMBLA0A3B6PH691e-115A0A3B6PH69_WHEAT; Uncharacterized protein
STRINGBRADI2G30800.11e-114(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97963344