PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00078.1.g00330.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 868aa MW: 94926.2 Da PI: 10.8551

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00078.1.g00330.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	79.4	5.7e-25	229	332	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkep.. 78 ++ r+ws eDe+++L++li f+ k+g + +d+ ++ +++ +++ +k+s++ql++KirrLK+K+k +ak+g+ep Zmw_sc00078.1.g00330.1.am.mk 229 RPPRVWSPEDEVTILRALIAFQGKKGRlpASIQDTAKLESQIGGQLIAKASTTQLSDKIRRLKHKYKLLAIRAKKGREPdl 309 578**********************777888*****************************998888777766500 PP DUF573 79 ....sfskehdqkifelskkiWg 97 ++ +h+++++elskk+Wg Zmw_sc00078.1.g00330.1.am.mk 310 erepDLPMDHEREVYELSKKVWG 332 000055678***********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	3.2E-23	231	332	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 868 aa Download sequence Send to blast
MAPKRPATGA AAAASGSASN ASDAEGDAGH QRRRRHSPSP ARTRSRSRSK TPPTNLRPNA 60 AALSATPIST GADYAAASDS DADGRDQSPR RRRERYPTPR SYSDADAAGR VPSPRRDRQR 120 SPRLYSDSDS DADAAAGGRI SSLRRSRDRS PRLHSEPDNS GATEGGGEGN VSPLPRARRS 180 TRIETSNIKP VSSRLMDEQR RSAGAASSQR RSKRRLRSPA LPSAEHNKRP PRVWSPEDEV 240 TILRALIAFQ GKKGRLPASI QDTAKLESQI GGQLIAKAST TQLSDKIRRL KHKYKLLAIR 300 AKKGREPDLE REPDLPMDHE REVYELSKKV WGAIGTDGFT EVGGSLTYEN AGDEESNEEQ 360 EIEESDEGMD SGWDVRDRPK KLKAFSENGS MNAIAGNGNV FATGCRSKAS QGGGGGKDYP 420 GKGQQMYPYL WEAVEELSKN HPSGQIFRKA FGVLEKAKAR VMEEKLRKFR MSEIRQQLRR 480 MDLMKETVTM VLDALEGTAA QAGLFHEPQG CLRAASRSRL AFQAFFPVTK PPLPSSFFPC 540 TCTLAPGHGR LLLNYGNSRV TQVQRLRSGP CNEKGSDRAR WNQESTWFIS PCHAWTEAAH 600 KYSKLHAKIT RTEKATEQHQ HNWLQRRLHP SVNPTTSTRS THERRNYRLL LETERTGGKL 660 APSPAWPASN TAAEAEITGR GQGRCICRKE KIQRKATGTR QKIASSDDVA RELYLTGGED 720 VRPLVHAARQ TRDESTGGDP VAALPASGGG ASSPVSRSRF LARRAARESS TKPRTARPLA 780 GVGLGWPPAE LRSQGHACAR PRGKGQATVR PRATRAPGRC ALHAPTSRPH EASHPPHGRS 840 VMTHPAAPAP SFHPPIPLCG VDELSDEL

Sequence ? help Back to Top

Protein Sequence Length: 868 aa Download sequence Send to blast

MAPKRPATGA AAAASGSASN ASDAEGDAGH QRRRRHSPSP ARTRSRSRSK TPPTNLRPNA  60
AALSATPIST GADYAAASDS DADGRDQSPR RRRERYPTPR SYSDADAAGR VPSPRRDRQR  120
SPRLYSDSDS DADAAAGGRI SSLRRSRDRS PRLHSEPDNS GATEGGGEGN VSPLPRARRS  180
TRIETSNIKP VSSRLMDEQR RSAGAASSQR RSKRRLRSPA LPSAEHNKRP PRVWSPEDEV  240
TILRALIAFQ GKKGRLPASI QDTAKLESQI GGQLIAKAST TQLSDKIRRL KHKYKLLAIR  300
AKKGREPDLE REPDLPMDHE REVYELSKKV WGAIGTDGFT EVGGSLTYEN AGDEESNEEQ  360
EIEESDEGMD SGWDVRDRPK KLKAFSENGS MNAIAGNGNV FATGCRSKAS QGGGGGKDYP  420
GKGQQMYPYL WEAVEELSKN HPSGQIFRKA FGVLEKAKAR VMEEKLRKFR MSEIRQQLRR  480
MDLMKETVTM VLDALEGTAA QAGLFHEPQG CLRAASRSRL AFQAFFPVTK PPLPSSFFPC  540
TCTLAPGHGR LLLNYGNSRV TQVQRLRSGP CNEKGSDRAR WNQESTWFIS PCHAWTEAAH  600
KYSKLHAKIT RTEKATEQHQ HNWLQRRLHP SVNPTTSTRS THERRNYRLL LETERTGGKL  660
APSPAWPASN TAAEAEITGR GQGRCICRKE KIQRKATGTR QKIASSDDVA RELYLTGGED  720
VRPLVHAARQ TRDESTGGDP VAALPASGGG ASSPVSRSRF LARRAARESS TKPRTARPLA  780
GVGLGWPPAE LRSQGHACAR PRGKGQATVR PRATRAPGRC ALHAPTSRPH EASHPPHGRS  840
VMTHPAAPAP SFHPPIPLCG VDELSDEL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025821022.1	1e-161	serine/arginine repetitive matrix protein 1-like
TrEMBL	A0A0A9BR30	0.0	A0A0A9BR30_ARUDO; Uncharacterized protein
STRING	Si013598m	1e-157	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2671	35	87