PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00093.1.g00280.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 391aa    MW: 42944.4 Da    PI: 9.0184
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00093.1.g00280.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY26.41.3e-081151611759
                                   T-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
                          WRKY  17 gsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
                                   g e+p  YY+C+++   +Cp+kk v+++ ++dp  + +t   eH++e
  Zmw_sc00093.1.g00280.1.am.mk 115 GEEVPMLYYKCSYSddhKCPAKKYVQQQnNSDPPQFLVTLVHEHTCE 161
                                   67899********99999*******876157999*******99*996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007742.7E-7114162IPR003657WRKY domain
SuperFamilySSF1182904.71E-8115161IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.3E-8115161IPR003657WRKY domain
PfamPF031068.6E-10115161IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MSTRPKSETV SPPPPSPRAP SNQRDAAIQE LRQQLELIPE VDRLEAAADN VSEIADAMES  60
SLSILQSESE QYYSSEAGAM AMTSPAVHSS DGSTGASRIA VPRARKVRHR RGRLGEEVPM  120
LYYKCSYSDD HKCPAKKYVQ QQNNSDPPQF LVTLVHEHTC EIFFRDEPSS SRSGSLQVLD  180
FRNASVCPPL TATTLGEGRA CERDRPGDPA APLVPAGLST DAGRFPDARF RTPNANHFDS  240
HGVMAAARPR PAARRCRHGR PVAPCDPPLS GHAPRPKPTV TVPRRDGCSC PEQSCGVPTD  300
ELIVMYPKGT YVTARLSTEG EVTVLARSPR NGEVLAWGTL TQMPIDLLRT ERRHVCQQSA  360
RIISAARRRV RRSTKKPRTW PSDPYLSSPL N
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944